Willem Jan Palenstijn

Full Name

W.J. Palenstijn

W.J.Palenstijn@cwi.nl

Phone

+31 20 592 4030

Room

L020b

Department(s)

Computational Imaging

Function(s)

Postdoc - Universiteit Leiden

Biography

After obtaining a PhD in number theory from Universiteit Leiden, I am now working on high performance computing for tomography, in particular using GPUs to accelerate reconstruction algorithms. I am the lead developer of the open-source ASTRA Tomography Toolbox.

Bossema, F., Palenstijn, W. J., Heginbotham, A., Corona, M., van Leeuwen, T., van Liere, R., … Batenburg, J. (2024). Enabling 3D CT-scanning of cultural heritage objects using only in-house 2D X-ray equipment in museums. Nature Communications, 15(1), 3939:1–3939:10. doi:10.1038/s41467-024-48102-w
Schoonhoven, R., Skorikov, A., Palenstijn, W. J., Pelt, D., Hendriksen, A., & Batenburg, J. (2024). How auto-differentiation can improve CT workflows: Classical algorithms in a modern framework. Optics Express, 32(6), 9019–9041. doi:10.1364/OE.502920
Bossema, F., Domínguez-Delmás, M., Palenstijn, W. J., Kostenko, A., Dorscheid, J., Coban, S., … Batenburg, J. (2021). A novel method for dendrochronology of large historical wooden objects using line trajectory X-ray tomography. Nature Scientific Reports, 11(1). doi:10.1038/s41598-021-90135-4
Hendriksen, A., Schut, D., Palenstijn, W. J., Viganò, N., Kim, J., Pelt, D., … Batenburg, J. (2021). Tomosipo: fast, flexible, and convenient 3D tomography for complex scanning geometries in Python. Optics Express, 29(24), 40494–40513. doi:10.1364/OE.439909
Kostenko, A., Palenstijn, W. J., Coban, S., Hendriksen, A., van Liere, R., & Batenburg, J. (2020). Prototyping X-ray tomographic reconstruction pipelines with FleXbox. SoftwareX, 11, 100364:1–100364:4. doi:10.1016/j.softx.2019.100364
Coban, S., Lucka, F., Palenstijn, W. J., Van Loo, D., & Batenburg, J. (2020). Explorative imaging and its implementation at the FleX-ray laboratory. Journal of Imaging, 6(4). doi:10.3390/jimaging6040018
Coban, S., Lucka, F., & Palenstijn, W. J. (2020). Dynamic 3D X-ray micro-CT data of a tablet dissolution in a water-based gel with dynamic changes in the scanning geometry. doi:10.5281/zenodo.3675371
Lagerwerf, R., Palenstijn, W. J., Kohr, H., & Batenburg, J. (2020). Automated FDK-filter selection for cone-beam CT in research environments. IEEE Transactions on Computational Imaging, 6, 739–748. doi:10.1109/TCI.2020.2971136
van Werkhoven, B., Palenstijn, W. J., & Sclocco, A. (2020). Lessons learned in a decade of research software engineering gpu applications. In International Conference on Computational Science, ICCS 2020 (pp. 399–412). doi:10.1007/978-3-030-50436-6_29
Buurlage, J.-W., Marone, F., Pelt, D., Palenstijn, W. J., Stampanoni, M., Batenburg, J., & Schlepütz, C. (2019). Real-time reconstruction and visualisation towards dynamic feedback control during time-resolved tomography experiments at TOMCAT. Nature Scientific Reports, 9(1), 18379:1–18379:11. doi:10.1038/s41598-019-54647-4

Willem Jan Palenstijn

Biography

Publications

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